ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hxfA1 - ECOD Domain | ECOD

ECOD/Domains/e5hxfA1

e5hxfA1

UID: 002028207

PDB

Range: A:1-182
PDB: 5HXF chain A(all domains)
UniProt: B8YLW0 (all domains)

Molecule: 3C protease

3D Structure

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Related Domains

Browse other domains in Peptidase_C3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyPeptidase_C3(1.1.17.2)

Ligands

in contact, ≤ 4 Å

Ethyl (4R)-4-{[(2R,5S)-2-(4-fluorobenzyl)-6-methyl-5-{[(5-methyl-1,2-oxazol-3-yl)carbonyl]amino}-4-oxoheptanoyl]amino}-5-[(3S)-2-oxo-3-pyrrolidinyl]pentanoateAG7
drugDrugBank DB02313

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF00548Peptidase_C3

3C cysteine protease (picornain 3C)

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5HXF RCSB PDB: 5HXF PDBe: 5HXF UniProt: B8YLW0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.