ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i06A1 - ECOD Domain | ECOD

ECOD/Domains/e5i06A1

e5i06A1

UID: 002028215

PDB

Range: A:10-384
PDB: 5I06 chain A(all domains)
UniProt: P28720 (all domains)
Gene: tgt

Molecule: Queuine tRNA-ribosyltransferase

3D Structure

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Related Domains

Browse other domains in TGT →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTGT(2002.1.1.73)

Ligands

in contact, ≤ 4 Å

6-AMINO-4-[2-(4-METHOXYPHENYL)ETHYL]-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONEE89
drugDrugBank DB07704
Zinc ionZN
metal

+ 3 additives (Glycerin, Triethylene glycol, 1,2-ETHANEDIOL)

Pfam Families

Queuine tRNA-ribosyltransferase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5I06 RCSB PDB: 5I06 PDBe: 5I06 UniProt: P28720

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.