ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i1wA1 - ECOD Domain | ECOD

ECOD/Domains/e5i1wA1

e5i1wA1

UID: 002028227

PDB

Range: A:220-500
PDB: 5I1W chain A(all domains)
UniProt: H8Y6P5 (all domains)

Molecule: CrmK

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
6-(hydroxymethyl)[2,2'-bipyridin]-4-ol67L

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 5I1W RCSB PDB: 5I1W PDBe: 5I1W UniProt: H8Y6P5

Downloads

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