ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5knlF1 - ECOD Domain | ECOD

ECOD/Domains/e5knlF1

e5knlF1

UID: 002028316

PDB

Range: F:1-167
PDB: 5KNL chain F(all domains)
UniProt: Q9Y818 (all domains)
Gene: ubc15

Molecule: Ubiquitin-conjugating enzyme E2 15

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 5KNL RCSB PDB: 5KNL PDBe: 5KNL UniProt: Q9Y818

Downloads

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