ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5krdB1 - ECOD Domain | ECOD

ECOD/Domains/e5krdB1

e5krdB1

UID: 002028330

PDB

Range: B:6-222
PDB: 5KRD chain B(all domains)
UniProt: F4KU78 (all domains)
Gene: IYD

Molecule: Nitroreductase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Nitroreductase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyNitroreductase(304.103.1.1)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
2-iodanylphenol6X8

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00881Nitroreductase

Nitroreductase family

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 5KRD RCSB PDB: 5KRD PDBe: 5KRD UniProt: F4KU78

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure