ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j72A5 - ECOD Domain | ECOD

ECOD/Domains/e5j72A5

e5j72A5

UID: 002029633

RepresentativePDB

Range: A:459-647
PDB: 5J72 chain A(all domains)
UniProt: Q183L9 (all domains)
Gene: cwp6

Molecule: Putative N-acetylmuramoyl-L-alanine amidase,autolysin cwp6

3D Structure

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Related Domains

Browse other domains in Amidase_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyAmidase_3(2011.1.1.5)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01520Amidase_3

N-acetylmuramoyl-L-alanine amidase

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 5J72 RCSB PDB: 5J72 PDBe: 5J72 UniProt: Q183L9

Downloads

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