ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jsoA1 - ECOD Domain | ECOD

ECOD/Domains/e5jsoA1

e5jsoA1

UID: 002032037

PDB

Range: A:1-190
PDB: 5JSO chain A(all domains)
UniProt: D0CY60 (all domains)
Gene: dddQ

Molecule: Dimethlysulfonioproprionate lyase DddQ

3D Structure

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Related Domains

Browse other domains in DMSP_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyDMSP_lyase(10.12.1.58)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (III) IONFE
metal

+ 1 additive (Tromethamine)

TromethamineTRS

Pfam Families

PF16867DMSP_lyase

Dimethlysulfonioproprionate lyase

ClanCL0029Cupin

External Links

ECOD PDB View: 5JSO RCSB PDB: 5JSO PDBe: 5JSO UniProt: D0CY60

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.