ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jsrB1 - ECOD Domain | ECOD

ECOD/Domains/e5jsrB1

e5jsrB1

UID: 002032042

PDB

Range: B:1-190
PDB: 5JSR chain B(all domains)
UniProt: D0CY60 (all domains)
Gene: dddQ

Molecule: Dimethlysulfonioproprionate lyase DddQ

3D Structure

Loading viewer...

Related Domains

Browse other domains in DMSP_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyDMSP_lyase(10.12.1.58)

Ligands

in contact, ≤ 4 Å

Acrylic AcidAKR
drugDrugBank DB02579
Bromide ionBR
Chloride ionCL

Pfam Families

PF16867DMSP_lyase

Dimethlysulfonioproprionate lyase

ClanCL0029Cupin

External Links

ECOD PDB View: 5JSR RCSB PDB: 5JSR PDBe: 5JSR UniProt: D0CY60

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

FE (III) IONFE

metal

Shown in the structure viewer. Drug annotations from DrugDomain.