ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x8sB3 - ECOD Domain | ECOD

ECOD/Domains/e2x8sB3

e2x8sB3

UID: 002032853

PDB

Range: B:371-470
PDB: 2X8S chain B(all domains)
UniProt: P42293 (all domains)
Gene: abn2

Molecule: ENDO-ALPHA-1,5-L-ARABINANASE

3D Structure

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Related Domains

Browse other domains in GH43_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupBarrel domain in extracellular arabinanase(9.28)

TT-groupBarrel domain in extracellular arabinanase(9.28.1)

FFamilyGH43_C(9.28.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

C-terminal lipocalin-like domain

ClanCL0116Calycin

External Links

ECOD PDB View: 2X8S RCSB PDB: 2X8S PDBe: 2X8S UniProt: P42293

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.