ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uc0B1 - ECOD Domain | ECOD

ECOD/Domains/e5uc0B1

e5uc0B1

UID: 002033091

PDB

Range: B:38-198
PDB: 5UC0 chain B(all domains)
UniProt: Q2YQA6 (all domains)
Gene: BAB1_1612

Molecule: Uncharacterized Protein COG5400

3D Structure

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Related Domains

Browse other domains in EipA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupVirulence associated protein B (Vapb)(3863)

HH-groupVirulence associated protein B (Vapb)(3863.1)

TT-groupVirulence associated protein B (Vapb)(3863.1.1)

FFamilyEipA(3863.1.1.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Sulfate ion, Pentaethylene glycol)

Sulfate ionSO4
DrugBank DB14546
Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Envelope integrity protein A

External Links

ECOD PDB View: 5UC0 RCSB PDB: 5UC0 PDBe: 5UC0 UniProt: Q2YQA6

Downloads

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