ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fwdA1 - ECOD Domain | ECOD

ECOD/Domains/e5fwdA1

e5fwdA1

UID: 002033745

PDB

Range: A:107-254
PDB: 5FWD chain A(all domains)
UniProt: Q3UKX1 (all domains)
Gene: Prmt2

Molecule: PROTEIN ARGININE N-METHYLTRANSFERASE 2

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMTS(2003.1.5.46)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
9-(7-{[amino(iminio)methyl]amino}-5,6,7-trideoxy-beta-D-ribo-heptofuranosyl)-9H-purin-6-amineGJV

+ 2 additives (1,2-ETHANEDIOL, Tetraethylene glycol)

1,2-ETHANEDIOL

Pfam Families

Methyltransferase small domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5FWD RCSB PDB: 5FWD PDBe: 5FWD UniProt: Q3UKX1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.