ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gp9B2 - ECOD Domain | ECOD

ECOD/Domains/e5gp9B2

e5gp9B2

UID: 002033750

PDB

Range: B:79-194
PDB: 5GP9 chain B(all domains)
UniProt: Q9K8A4 (all domains)
Gene: BH3102

Molecule: Transcriptional regulator (TetR/AcrR family)

3D Structure

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Related Domains

Browse other domains in TetR_C_4 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTetracyclin repressor-like, C-terminal domain(191)

HH-groupTetracyclin repressor-like, C-terminal domain(191.1)

TT-groupTetracyclin repressor-like, C-terminal domain(191.1.1)

FFamilyTetR_C_4(191.1.1.2)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Glycerin)

Pfam Families

PF08359TetR_C_4

YsiA-like protein, C-terminal region

ClanCL0174TetR_C

External Links

ECOD PDB View: 5GP9 RCSB PDB: 5GP9 PDBe: 5GP9 UniProt: Q9K8A4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.