ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gpaB2 - ECOD Domain | ECOD

ECOD/Domains/e5gpaB2

e5gpaB2

UID: 002033754

PDB

Range: B:8-78
PDB: 5GPA chain B(all domains)
UniProt: Q9K8A4 (all domains)
Gene: BH3102

Molecule: Transcriptional regulator (TetR/AcrR family)

3D Structure

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Related Domains

Browse other domains in TetR_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyTetR_N(101.1.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Bacterial regulatory proteins, tetR family

ClanCL0123HTH

External Links

ECOD PDB View: 5GPA RCSB PDB: 5GPA PDBe: 5GPA UniProt: Q9K8A4

Downloads

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