ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5udlA1 - ECOD Domain | ECOD

ECOD/Domains/e5udlA1

e5udlA1

UID: 002034210

PDB

Range: A:8-467
PDB: 5UDL chain A(all domains)
UniProt: P09914 (all domains)
Gene: IFIT1

Molecule: Interferon-induced protein with tetratricopeptide repeats 1

3D Structure

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Related Domains

Browse other domains in TPR_8, TPR_10, TPR_12 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyTPR_8, TPR_10, TPR_12(109.4.1.1304)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 1 additive (Triethylene glycol)

Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

Tetratricopeptide repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5UDL RCSB PDB: 5UDL PDBe: 5UDL UniProt: P09914

Downloads

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