ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rgqB2 - ECOD Domain | ECOD

ECOD/Domains/e4rgqB2

e4rgqB2

UID: 002035867

PDB

Range: B:1-135
PDB: 4RGQ chain B(all domains)
UniProt: Q58122 (all domains)
Gene: egsA

Molecule: Glycerol-1-phosphate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Fe-ADH_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupRossmann-like domain in dehydroquinate synthase-like enzymes(2007.1.7)

FFamilyFe-ADH_2(2007.1.7.3)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
SN-GLYCEROL-1-PHOSPHATE1GP
Potassium ionK

Pfam Families

PF13685Fe-ADH_2

Iron-containing alcohol dehydrogenase

ClanCL0224DHQS

External Links

ECOD PDB View: 4RGQ RCSB PDB: 4RGQ PDBe: 4RGQ UniProt: Q58122

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.