ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j5iJ1 - ECOD Domain | ECOD

ECOD/Domains/e5j5iJ1

e5j5iJ1

UID: 002036752

PDB

Range: J:1-204
PDB: 5J5I chain J(all domains)
UniProt: P58154 (all domains)

Molecule: Acetylcholine-binding protein

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
4-(2-amino-6-{bis[(pyridin-2-yl)methyl]amino}pyrimidin-4-yl)phenol6GM

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 5J5I RCSB PDB: 5J5I PDBe: 5J5I UniProt: P58154

Downloads

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DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.