ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jliA1 - ECOD Domain | ECOD

ECOD/Domains/e5jliA1

e5jliA1

UID: 002036754

PDB

Range: A:1-127
PDB: 5JLI chain A(all domains)
UniProt: P00138 (all domains)

Molecule: Cytochrome c'

3D Structure

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Related Domains

Browse other domains in Cytochrom_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyCytochrom_C_2(601.2.1.4)

Ligands

in contact, ≤ 4 Å

Ascorbic acidASC
drugDrugBank DB00126
Ferroheme CHEC
drugDrugBank DB03317
Nitric oxide

Pfam Families

PF01322Cytochrom_C_2

Cytochrome C'

External Links

ECOD PDB View: 5JLI RCSB PDB: 5JLI PDBe: 5JLI UniProt: P00138

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.