ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uk5A1 - ECOD Domain | ECOD

ECOD/Domains/e5uk5A1

e5uk5A1

UID: 002037118

PDB

Range: A:411-450
PDB: 5UK5 chain A(all domains)
UniProt: Q07008 (all domains)
Gene: Notch1

Molecule: Neurogenic locus notch homolog protein 1

3D Structure

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Related Domains

Browse other domains in EGF_CA →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF_CA(389.1.1.7)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

Calcium-binding EGF domain

ClanCL0001EGF

External Links

ECOD PDB View: 5UK5 RCSB PDB: 5UK5 PDBe: 5UK5 UniProt: Q07008

Downloads

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Calcium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.