ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tinE1 - ECOD Domain | ECOD

ECOD/Domains/e5tinE1

e5tinE1

UID: 002038399

PDB

Range: E:8-218
PDB: 5TIN chain E(all domains)
UniProt: O75311 (all domains)
Gene: GLRA3

Molecule: Glycine receptor subunit alpha-3

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145
(3S,3aS,9bS)-2-[(2H-1,3-benzodioxol-5-yl)sulfonyl]-3,5-dimethyl-1,2,3,3a,5,9b-hexahydro-4H-pyrrolo[3,4-c][1,6]naphthyridin-4-one7C6
Zinc ion

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 5TIN RCSB PDB: 5TIN PDBe: 5TIN UniProt: O75311

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.