ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uqpA1 - ECOD Domain | ECOD

ECOD/Domains/e5uqpA1

e5uqpA1

UID: 002038523

PDB

Range: A:13-122
PDB: 5UQP chain A(all domains)
UniProt: Q0RYE0 (all domains)
Gene: RHA1_ro08652

Molecule: Cupin

3D Structure

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Related Domains

Browse other domains in Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_2(10.12.1.39)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 5UQP RCSB PDB: 5UQP PDBe: 5UQP UniProt: Q0RYE0

Downloads

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DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.