ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b3hF1 - ECOD Domain | ECOD

ECOD/Domains/e5b3hF1

e5b3hF1

UID: 002038524

PDB

Range: F:158-210
PDB: 5B3H chain F(all domains)
UniProt: Q700D2 (all domains)
Gene: JKD

Molecule: Zinc finger protein JACKDAW

3D Structure

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Related Domains

Browse other domains in BIRD-IDD transcription factor, fourth C2HC zinc finger / BIRD-IDD transcription factor, third C2HC zinc finger →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyBIRD-IDD transcription factor, fourth C2HC zinc finger / BIRD-IDD transcription factor, third C2HC zinc finger(386.1.1.62)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22992C2CH-4th_BIRD-IDD

BIRD-IDD transcription factor, fourth C2HC zinc finger

ClanCL0361C2H2-zf

PF22995C2CH-3rd_BIRD-IDD

BIRD-IDD transcription factor, third C2HC zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 5B3H RCSB PDB: 5B3H PDBe: 5B3H UniProt: Q700D2

Downloads

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