ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b7dA2 - ECOD Domain | ECOD

ECOD/Domains/e5b7dA2

e5b7dA2

UID: 002041650

PDB

Range: A:83-87,A:94-169,A:275-301
PDB: 5B7D chain A(all domains)
UniProt: A0A087I947 (all domains)
Gene: AL548_021745

Molecule: LysR family transcriptional regulator

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 5B7D RCSB PDB: 5B7D PDBe: 5B7D UniProt: A0A087I947

Downloads

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