ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5l8r21 - ECOD Domain | ECOD

ECOD/Domains/e5l8r21

e5l8r21

UID: 002042076

PDB

Range: 2:58-265
PDB: 5L8R chain 2(all domains)
UniProt: Q41038 (all domains)
Gene: lhaB

Molecule: Chlorophyll a-b binding protein, chloroplastic

3D Structure

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Related Domains

Browse other domains in Chloroa_b-bind →

Classification

AArchitectureextended segments(a.20)

XX-groupChlorophyll a-b binding protein(5077)

HH-groupChlorophyll a-b binding protein(5077.1)

TT-groupChlorophyll a-b binding protein(5077.1.1)

FFamilyChloroa_b-bind(5077.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll BCHL
drugDrugBank DB04506
Chlorophyll A

Pfam Families

PF00504Chloroa_b-bind

Chlorophyll A-B binding protein

External Links

ECOD PDB View: 5L8R RCSB PDB: 5L8R PDBe: 5L8R UniProt: Q41038

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB02133

Digalactosyl Diacyl Glycerol (Dgdg)DGD

drugDrugBank DB03426

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG

drugDrugBank DB02043

(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOLLUT

drugDrugBank DB00137

ViolaxanthinXAT

drugDrugBank DB03460

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.