ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5llyA3 - ECOD Domain | ECOD

ECOD/Domains/e5llyA3

e5llyA3

UID: 002042120

PDB

Range: A:9-127
PDB: 5LLY chain A(all domains)
UniProt: F7RW09 (all domains)

Molecule: Diguanylate cyclase (GGDEF) domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in PAS_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_2(223.1.1.12)

Ligands

in contact, ≤ 4 Å

3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acidLBV
Chloride ionCL
within 5 Å only

Shown in the structure viewer.

Pfam Families

PAS fold

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 5LLY RCSB PDB: 5LLY PDBe: 5LLY UniProt: F7RW09

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.