ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5pojB1 - ECOD Domain | ECOD

ECOD/Domains/e5pojB1

e5pojB1

UID: 002042512

PDB

Range: B:23-144
PDB: 5POJ chain B(all domains)
UniProt: O95696 (all domains)
Gene: BRD1

Molecule: Bromodomain-containing protein 1

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(1-benzylpiperidin-4-yl)acetamide8RV
Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5POJ RCSB PDB: 5POJ PDBe: 5POJ UniProt: O95696

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.