ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5pwcA2 - ECOD Domain | ECOD

ECOD/Domains/e5pwcA2

e5pwcA2

UID: 002042548

PDB

Range: A:701-752
PDB: 5PWC chain A(all domains)
UniProt: H0Y4R8 (all domains)
Gene: SP100

Molecule: Nuclear autoantigen Sp-100

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Ligands

in contact, ≤ 4 Å

2,4-dichloro-N-(pyridin-3-yl)benzamideW77
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PHD-finger

ClanCL0229RING

External Links

ECOD PDB View: 5PWC RCSB PDB: 5PWC PDBe: 5PWC UniProt: H0Y4R8

Downloads

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