ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5twnA2 - ECOD Domain | ECOD

ECOD/Domains/e5twnA2

e5twnA2

UID: 002042616

PDB

Range: A:358-573
PDB: 5TWN chain A(all domains)
UniProt: Q9WMX2 (all domains)

Molecule: NS5B RNA- DEPENDENT RNA POLYMERASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-grouphelical bundle domain in reverse transcriptase-like polymerases(4967)

HH-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1)

TT-grouphelical bundle domain in reverse transcriptase-like polymerases(4967.1.1)

FFamilyRdRP_3(4967.1.1.5)

Ligands

in contact, ≤ 4 Å

(2E)-3-(4-{[(1-{[(13-cyclohexyl-6-oxo-6,7-dihydro-5H-indolo[1,2-d][1,4]benzodiazepin-10-yl)carbonyl]amino}cyclopentyl)carbonyl]amino}phenyl)prop-2-enoic acid23E

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 5TWN RCSB PDB: 5TWN PDBe: 5TWN UniProt: Q9WMX2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure