ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5usdC1 - ECOD Domain | ECOD

ECOD/Domains/e5usdC1

e5usdC1

UID: 002042762

PDB

Range: C:156-328
PDB: 5USD chain C(all domains)
UniProt: A0A1Q4LWC0 (all domains)

Molecule: Peptidase S66

3D Structure

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Related Domains

Browse other domains in Peptidase_S66C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyPeptidase_S66C(2487.1.1.18)

Ligands

in contact, ≤ 4 Å

5'-O-(L-alpha-aspartylsulfamoyl)adenosineDSZ

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17676Peptidase_S66C

LD-carboxypeptidase C-terminal domain

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 5USD RCSB PDB: 5USD PDBe: 5USD UniProt: A0A1Q4LWC0

Downloads

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