ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n58B2 - ECOD Domain | ECOD

ECOD/Domains/e4n58B2

e4n58B2

UID: 002043146

PDB

Range: B:95-273
PDB: 4N58 chain B(all domains)
UniProt: A0A067XG75 (all domains)

Molecule: Pectocin M2

3D Structure

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Related Domains

Browse other domains in Colicin_M →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupColicin M-related(3173)

HH-groupColicin M-related(3173.1)

TT-groupColicin M-related(3173.1.1)

FFamilyColicin_M(3173.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol, Sulfate ion)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Sulfate ion

Pfam Families

PF14859Colicin_M

Colicin M

ClanCL0091NAD_Ferredoxin

External Links

ECOD PDB View: 4N58 RCSB PDB: 4N58 PDBe: 4N58 UniProt: A0A067XG75

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.