ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fyeC1 - ECOD Domain | ECOD

ECOD/Domains/e5fyeC1

e5fyeC1

UID: 002044941

PDB

Range: C:1-293
PDB: 5FYE chain C(all domains)
UniProt: Q9HU22 (all domains)
Gene: rmlA

Molecule: GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in NTP_transferase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyNTP_transferase(7516.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
N-(6-Amino-1-(3-fluorobenzyl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-N-methylbenzenesulfonamideLD6

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES

Pfam Families

PF00483NTP_transferase

Nucleotidyl transferase

ClanCL0110GT-A

External Links

ECOD PDB View: 5FYE RCSB PDB: 5FYE PDBe: 5FYE UniProt: Q9HU22

Downloads

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DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.