ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5msyB1 - ECOD Domain | ECOD

ECOD/Domains/e5msyB1

e5msyB1

UID: 002045447

PDB

Range: B:28-372
PDB: 5MSY chain B(all domains)
UniProt: Q8A905 (all domains)
Gene: BT_1012

Molecule: Glycoside hydrolase

3D Structure

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Related Domains

Browse other domains in DUF4038 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDUF4038(2002.1.1.171)

Ligands

in contact, ≤ 4 Å

AmmoniaNH3

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13204Apiosidase

Apiosidase-like, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5MSY RCSB PDB: 5MSY PDBe: 5MSY UniProt: Q8A905

Downloads

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