ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mw4A1 - ECOD Domain | ECOD

ECOD/Domains/e5mw4A1

e5mw4A1

UID: 002045470

PDB

Range: A:5-331
PDB: 5MW4 chain A(all domains)
UniProt: Q8TEK3 (all domains)
Gene: DOT1L

Molecule: Histone-lysine N-methyltransferase, H3 lysine-79 specific

3D Structure

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Related Domains

Browse other domains in DOT1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDOT1(2003.1.5.65)

Ligands

in contact, ≤ 4 Å

N~2~-{[2-chloro-3-(2-methylpyridin-3-yl)-1-benzothiophen-5-yl]carbamoyl}-N-(3-{methyl[(3R)-1-(5H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]amino}propyl)glycinamide5JU

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Histone methylation protein DOT1

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5MW4 RCSB PDB: 5MW4 PDBe: 5MW4 UniProt: Q8TEK3

Downloads

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Drug annotations from DrugDomain.