ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5x4lB2 - ECOD Domain | ECOD

ECOD/Domains/e5x4lB2

e5x4lB2

UID: 002046451

PDB

Range: B:24-106
PDB: 5X4L chain B(all domains)
UniProt: P55072 (all domains)
Gene: VCP

Molecule: Transitional endoplasmic reticulum ATPase

3D Structure

Loading viewer...

Related Domains

Browse other domains in CDC48_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyCDC48_N(1.1.2.7)

Pfam Families

PF02359CDC48_N

Cell division protein 48 (CDC48), N-terminal domain

ClanCL0199DPBB

External Links

ECOD PDB View: 5X4L RCSB PDB: 5X4L PDBe: 5X4L UniProt: P55072

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure