ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5imhA1 - ECOD Domain | ECOD

ECOD/Domains/e5imhA1

e5imhA1

UID: 002047905

PDB

Range: A:3-469
PDB: 5IMH chain A(all domains)

Molecule: Dipeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_C69 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupPenicillin acylase, catalytic domain(210.1.2)

FFamilyPeptidase_C69(210.1.2.5)

Ligands

in contact, ≤ 4 Å

COBALT (II) IONCO
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03577Peptidase_C69

Peptidase family C69

ClanCL0052NTN

External Links

ECOD PDB View: 5IMH RCSB PDB: 5IMH PDBe: 5IMH

Downloads

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