ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mqrA2 - ECOD Domain | ECOD

ECOD/Domains/e5mqrA2

e5mqrA2

UID: 002048191

RepresentativePDB

Range: A:412-614
PDB: 5MQR chain A(all domains)
UniProt: Q8A8Z7 (all domains)
Gene: BT_1020

Molecule: Beta-L-arabinobiosidase

3D Structure

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Related Domains

Browse other domains in Sialidase-like_CBM →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilySialidase-like_CBM(10.1.1.54)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Sodium ionNA
metal

+ 2 additives (4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Triethylene glycol)

4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDEPE

Pfam Families

PF22585Sialidase-like_CBM

Sialidase-like, CBM domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 5MQR RCSB PDB: 5MQR PDBe: 5MQR UniProt: Q8A8Z7

Downloads

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Triethylene glycol

Shown in the structure viewer. Drug annotations from DrugDomain.