ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5m7sB1 - ECOD Domain | ECOD

ECOD/Domains/e5m7sB1

e5m7sB1

UID: 002048496

PDB

Range: B:59-336,B:373-395,B:538-695
PDB: 5M7S chain B(all domains)
UniProt: O60502 (all domains)
Gene: OGA

Molecule: Protein O-GlcNAcase

3D Structure

Loading viewer...

Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

(3AR,5R,6S,7R,7AR)-2-(ETHYLAMINO)-5-(HYDROXYMETHYL)-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOLNHT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5M7S RCSB PDB: 5M7S PDBe: 5M7S UniProt: O60502

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure