ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m7tB1 - ECOD Domain | ECOD

ECOD/Domains/e5m7tB1

e5m7tB1

UID: 002048498

PDB

Range: B:59-336,B:373-395,B:537-695
PDB: 5M7T chain B(all domains)
UniProt: O60502 (all domains)
Gene: OGA

Molecule: Protein O-GlcNAcase

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

(5R,6R,7R,8S)-8-(ACETYLAMINO)-6,7-DIHYDROXY-5-(HYDROXYMETHYL)-N-PHENYL-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-2-CARBOXAMIDEGDV

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5M7T RCSB PDB: 5M7T PDBe: 5M7T UniProt: O60502

Downloads

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