ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m7uB1 - ECOD Domain | ECOD

ECOD/Domains/e5m7uB1

e5m7uB1

UID: 002048500

PDB

Range: B:59-336,B:373-395,B:537-695
PDB: 5M7U chain B(all domains)
UniProt: O60502 (all domains)
Gene: OGA

Molecule: Protein O-GlcNAcase

3D Structure

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Related Domains

Browse other domains in NAGidase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyNAGidase(2002.1.1.150)

Ligands

in contact, ≤ 4 Å

2-[(2~{R},3~{S},4~{R},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-[3-[3-(trifluoromethyl)phenyl]propyl]pyrrolidin-2-yl]-~{N}-methyl-ethanamideXHA

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07555NAGidase

beta-N-acetylglucosaminidase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5M7U RCSB PDB: 5M7U PDBe: 5M7U UniProt: O60502

Downloads

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