ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mu8m1 - ECOD Domain | ECOD

ECOD/Domains/e5mu8m1

e5mu8m1

UID: 002048558

PDB

Range: m:9-157
PDB: 5MU8 chain m(all domains)
UniProt: P01375 (all domains)
Gene: TNF

Molecule: Tumor necrosis factor

3D Structure

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Related Domains

Browse other domains in TNF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupTNF-like(10.3)

TT-groupTNF-like(10.3.1)

FFamilyTNF(10.3.1.1)

Ligands

in contact, ≤ 4 Å

~{N}4-(phenylmethyl)-~{N}4-[2-[3-(2-piperazin-1-ylpyrimidin-5-yl)phenyl]phenyl]pyrimidine-2,4-diamineJNI

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

TNF(Tumour Necrosis Factor) family

ClanCL0100C1q_TNF

External Links

ECOD PDB View: 5MU8 RCSB PDB: 5MU8 PDBe: 5MU8 UniProt: P01375

Downloads

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