ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t4jB2 - ECOD Domain | ECOD

ECOD/Domains/e5t4jB2

e5t4jB2

UID: 002049142

PDB

Range: B:107-360
PDB: 5T4J chain B(all domains)
UniProt: P94426 (all domains)
Gene: gabR

Molecule: HTH-type transcriptional regulatory protein GabR

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

gamma-Aminobutyric acidABU
drugDrugBank DB02530
Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer.

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5T4J RCSB PDB: 5T4J PDBe: 5T4J UniProt: P94426

Downloads

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Drug annotations from DrugDomain.