ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tspB1 - ECOD Domain | ECOD

ECOD/Domains/e5tspB1

e5tspB1

UID: 002049167

PDB

Range: B:243-690
PDB: 5TSP chain B(all domains)
UniProt: A0A0H2YQR1 (all domains)
Gene: nanI

Molecule: Sialidase

3D Structure

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Related Domains

Browse other domains in BNR, BNR_3 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyBNR, BNR_3(5.1.3.143)

Ligands

in contact, ≤ 4 Å

N-cyclohexyltaurineNHE
drugDrugBank DB03309
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

BNR/Asp-box repeat

ClanCL0186Beta_propeller

BNR repeat-like domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5TSP RCSB PDB: 5TSP PDBe: 5TSP UniProt: A0A0H2YQR1

Downloads

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