ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ukfC1 - ECOD Domain | ECOD

ECOD/Domains/e5ukfC1

e5ukfC1

UID: 002049257

PDB

Range: C:21-341
PDB: 5UKF chain C(all domains)
UniProt: Q99986 (all domains)
Gene: VRK1

Molecule: Serine/threonine-protein kinase VRK1

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

4-{[(Z)-(7-oxo-6,7-dihydro-8H-[1,3]thiazolo[5,4-e]indol-8-ylidene)methyl]amino}benzene-1-sulfonamide8E1
Chloride ionCL

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5UKF RCSB PDB: 5UKF PDBe: 5UKF UniProt: Q99986

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.