ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v6qB2 - ECOD Domain | ECOD

ECOD/Domains/e5v6qB2

e5v6qB2

UID: 002049371

PDB

Range: B:1-108,B:282-319
PDB: 5V6Q chain B(all domains)
UniProt: Q92LZ4 (all domains)
Gene: SMc04462

Molecule: NADPH-dependent glyoxylate/hydroxypyruvate reductase

3D Structure

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Related Domains

Browse other domains in 2-Hacid_dh →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFormate/glycerate dehydrogenase catalytic domain-like(2003.1.11)

FFamily2-Hacid_dh(2003.1.11.1)

Ligands

in contact, ≤ 4 Å

Malonic acidMLA
drugDrugBank DB02175
Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

Shown in the structure viewer.

Pfam Families

PF003892-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5V6Q RCSB PDB: 5V6Q PDBe: 5V6Q UniProt: Q92LZ4

Downloads

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Drug annotations from DrugDomain.