ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jy6D2 - ECOD Domain | ECOD

ECOD/Domains/e3jy6D2

e3jy6D2

UID: 002050357

PDB

Range: D:68-167,D:295-328
PDB: 3JY6 chain D(all domains)
UniProt: Q03T70 (all domains)
Gene: LVIS_0444

Molecule: Transcriptional regulator, LacI family

3D Structure

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Related Domains

Browse other domains in Peripla_BP_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_1(2007.1.2.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00532Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 3JY6 RCSB PDB: 3JY6 PDBe: 3JY6 UniProt: Q03T70

Downloads

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