ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k1aC3 - ECOD Domain | ECOD

ECOD/Domains/e3k1aC3

e3k1aC3

UID: 002050367

PDB

Range: C:5-210
PDB: 3K1A chain C(all domains)
UniProt: P07328 (all domains)
Gene: nifD

Molecule: Nitrogenase molybdenum-iron protein alpha chain

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

FE(7)-MO-S(9)-N CLUSTERCFN
FE(8)-S(7) CLUSTERCLF
3-HYDROXY-3-CARBOXY-ADIPIC ACIDHCA

Shown in the structure viewer.

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 3K1A RCSB PDB: 3K1A PDBe: 3K1A UniProt: P07328

Downloads

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Drug annotations from DrugDomain.