ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mioC2 - ECOD Domain | ECOD

ECOD/Domains/e1mioC2

e1mioC2

UID: 002050520

PDB

Range: C:2-201
PDB: 1MIO chain C(all domains)
UniProt: P00467 (all domains)
Gene: nifD

Molecule: NITROGENASE MOLYBDENUM IRON PROTEIN (ALPHA CHAIN)

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

Fe-mo-s clusterCFM
Fe-s clusterCLP
3-HYDROXY-3-CARBOXY-ADIPIC ACIDHCA

Shown in the structure viewer.

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 1MIO RCSB PDB: 1MIO PDBe: 1MIO UniProt: P00467

Downloads

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Drug annotations from DrugDomain.