ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mo9A1 - ECOD Domain | ECOD

ECOD/Domains/e4mo9A1

e4mo9A1

UID: 002050559

PDB

Range: A:181-366
PDB: 4MO9 chain A(all domains)
UniProt: D1BQR9 (all domains)

Molecule: Periplasmic binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyPeripla_BP_2(2007.1.14.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01497Peripla_BP_2

Periplasmic binding protein

ClanCL0043Chelatase

External Links

ECOD PDB View: 4MO9 RCSB PDB: 4MO9 PDBe: 4MO9 UniProt: D1BQR9

Downloads

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