ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qh1A1 - ECOD Domain | ECOD

ECOD/Domains/e1qh1A1

e1qh1A1

UID: 002050838

PDB

Range: A:330-478
PDB: 1QH1 chain A(all domains)
UniProt: P00466 (all domains)
Gene: nifD

Molecule: PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN)

3D Structure

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Related Domains

Browse other domains in Oxidored_nitro →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyOxidored_nitro(2007.1.14.1)

Ligands

in contact, ≤ 4 Å

Fe-mo-s clusterCFM
3-HYDROXY-3-CARBOXY-ADIPIC ACIDHCA

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00148Oxidored_nitro

Nitrogenase component 1 type Oxidoreductase

ClanCL0043Chelatase

External Links

ECOD PDB View: 1QH1 RCSB PDB: 1QH1 PDBe: 1QH1 UniProt: P00466

Downloads

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