ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m2qB1 - ECOD Domain | ECOD

ECOD/Domains/e5m2qB1

e5m2qB1

UID: 002051730

PDB

Range: B:21-138
PDB: 5M2Q chain B(all domains)
UniProt: P37028 (all domains)
Gene: btuF

Molecule: Outer membrane protein A,Vitamin B12-binding protein

3D Structure

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Related Domains

Browse other domains in Peripla_BP_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupChelatase-like(2007.1.14)

FFamilyPeripla_BP_2(2007.1.14.5)

Ligands

in contact, ≤ 4 Å

COB(II)INAMIDECBY

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01497Peripla_BP_2

Periplasmic binding protein

ClanCL0043Chelatase

External Links

ECOD PDB View: 5M2Q RCSB PDB: 5M2Q PDBe: 5M2Q UniProt: P37028

Downloads

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