ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hxqC1 - ECOD Domain | ECOD

ECOD/Domains/e5hxqC1

e5hxqC1

UID: 002055239

PDB

Range: C:71-297
PDB: 5HXQ chain C(all domains)
UniProt: B8XA40 (all domains)
Gene: ZFPS

Molecule: (2Z,6Z)-farnesyl diphosphate synthase, chloroplastic

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Dimethylallyl S-ThiolodiphosphateDST
drugDrugBank DB02270
1,4,7,10,13,16-HEXAOXACYCLOOCTADECANEO4B

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 5HXQ RCSB PDB: 5HXQ PDBe: 5HXQ UniProt: B8XA40

Downloads

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